Updated 2019-07-10

trim_galore.pbs

#PBS -N trimgaloreTest
#PBS -l nodes=1:ppn=2
#PBS -l pmem=2gb
#PBS -l walltime=3:00
#PBS -q force-6
#PBS -j oe
#PBS -o trimgaloreTest.out

cd $PBS_O_WORKDIR
module load python/2.7
module load fastqc/0.10.1
module load trim_galore/0.3.7

trim_galore SP1.fq