Updated 2019-02-04

bedtools.pbs

#PBS -N bedtoolsTest
#PBS -l nodes=2:ppn=4
#PBS -l walltime=20:00
#PBS -q iw-shared-6
#PBS -j oe
#PBS -o bedtoolsResult.out

cd $PBS_O_WORKDIR
module load gcc/4.9.0
module load bedtools/2.25
bedtools intersect -a reads.bed -b genes.bed